SHAQED CARASSO
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  • 2025
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Publications

2025

Dietary carbohydrates alter immune-modulatory functionalities and DNA inversions in Bacteroides thetaiotaomicron, Nature Communications (2025)
Gal-Mandelbaum N, Carasso S, Kedem A, Ziv T, Keshet-David R, Abboud R, Zaatry R, Gefen T, Geva-Zatorsky N

Esophageal microbiome correlates with post-esophagectomy anastomotic leak in cancer patients, ESMO Gastrointestinal Oncology (2025)
#Naddaf R, #Shmilovich H, #Carasso S, Keshet-David R, Herren R, Gefen T, Goshen-Lago T, Zwang Y, Livyatan I, Shental N, Haberfeld O, Straussman R, Markar S.R., Nilsson M, Kashtan H, Ben-Aharon I, Geva-Zatorsky N

Bacteriophage-driven DNA inversions shape bacterial functionality and long-term co-existence in Bacteroides fragilis, Gut Microbes (2025)
#Carasso S, #Keshet-David R, Zhang J, Hajjo H, Kadosh-Kariti D, Gefen T, Geva-Zatorsky N

2024

Inflammation and bacteriophages affect DNA inversion states and functionality of the gut microbiota, Cell Host & Microbe (2024)
#Carasso S, #Zaatry R, #Hajjo H, #Kadosh-Kariti D, Ben-Assa N, Naddaf N, Mandelbaum N, Pressman S, Chowers Y, Gefen T, Jeffrey K.L., Jofre J, Coyne M.J., Comstock L.E., Sharon I, Geva-Zatorsky N

2023

Gut microbial signatures are associated with Lynch syndrome (LS) and cancer history in Druze communities in Israel, Scientific Reports (2023)
#Naddaf R, #Carasso S, Reznick-Levi G, Hasnis E, Qarawani A, Maza I, Gefen T, Half E. E., Geva-Zatorsky N

Extracellular vesicles of the Gram-positive gut symbiont *Bifidobacterium longum* induce immune-modulatory, anti-inflammatory effects, npj Biofilms and Microbiomes (2023)
Mandelbaum N, Zhang L, Carasso S, Ziv T, Lifshiz-Simon S, Davidovich I, Luz I, Berinstein E, Gefen T, Cooks T, Talmon Y, Balskus E. P., Geva-Zatorsky N

2022

Microbiome characterization of infected diabetic foot ulcers in association with clinical outcomes: traditional cultures versus molecular sequencing methods, Front. Cell. Infect. Microbiol (2022)
#Mudrik-Zohar H, #Carasso S, Gefen T, Zalmanovich A, Katzir M, Cohen Y, Paitan Y, Geva-Zatorsky N, Chowers M

2021

The mechanical cost of decreasing conduction velocity: a mathematical model of pacing-induced lower strain, J Atr Fibrillation (2021)
Marai I, Carasso D, Carasso S, Carasso S

Metagenomic analysis reveals the signature of gut microbiota associated with human chronotypes, FASEB J (2021)
Carasso S, Fishman B, Lask LS, Shochat T, Geva-Zatorsky N, Tauber E

“More guts than brains?”--the role of gut microbiota in idiopathic intracranial hypertension, Journal of Neuro-Ophthalmology (2021)
Berkowitz E, Kopelman Y, Kadosh D, Carasso S, Tiosano B, Kesler A, Geva-Zatorsky N

2020

Analysis of a phase-variable restriction modification system of the human gut symbiont *Bacteroides fragilis, Nucleic Acids Research (2020)
Ben-Assa N, Coyne MJ, Fomenkov A, Livny J, Robins WP, Muniesa M, Carey V, Carasso S, Gefen T, Jofre J, Roberts RJ, Comstock LE, Geva-Zatorsky N

Oral capsulized fecal microbiota transplantation for eradication of carbapenemase-producing Enterobacteriaceae colonization with a metagenomic perspective, Clinical Infectious Diseases (2020)
#Bar-Yoseph H, #Carasso S, Shklar S, Korytny A, Even Dar R, Daoud H, Nassar R, Maharshak N, Hussein K, Geffen Y, Chowers Y, Geva-Zatorsky N, Paul M

Phage-Bacteria Associations: Analyze. Match. Develop Therapies, Cell Host & Microbe (2020)
Carasso S, Hajjo H, Geva-Zatorsky N

 
About
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In the Press
Intestinal bacteria’s reaction to inflammation effects immunity - The Jerusalem Post

SHAQED CARASSO
I’m a PhD Candidate in Bioinformatics, mentored by Professors Naama Geva-Zatorsky (Technion) and Itai Sharon (MIGAL). My research focuses on the gut microbiome, combining…

Updates

Creating Visuals During My PhD, with PPT
During my PhD, I began using PowerPoint as my primary tool for creating vector assets and figures, which allowed me to design some really fun illustrations to effectively…

My work was featured in nature reviews gastroenterology & hepatology’s 2024 Year in Review!
IBD in 2024
Dec 15, 2024

My work on gut bacteria’s DNA inversions in inflammation was mentioned in the news
Check out the links below
Apr 10, 2024

My work on microbiome differences between night owls and morning people was mentioned in the news
Check out the links below
Jan 3, 2022
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Copyright 2024, Shaqed Carasso